Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Gm2756-201ENSMUST00000195851 400 ntBASIC16.13■□□□□ 0.17
Shmt1P50431 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Shmt1P50431 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Shmt1P50431 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shmt1P50431 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Shmt1P50431 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Gm14822-201ENSMUST00000122247 291 ntBASIC16.12■□□□□ 0.17
Shmt1P50431 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Gm24513-201ENSMUST00000174964 138 ntBASIC16.12■□□□□ 0.17
Shmt1P50431 Gm5177-201ENSMUST00000183092 997 ntBASIC16.12■□□□□ 0.17
Shmt1P50431 Gm27397-201ENSMUST00000184997 107 ntBASIC16.12■□□□□ 0.17
Shmt1P50431 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shmt1P50431 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.12■□□□□ 0.17
Shmt1P50431 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.12■□□□□ 0.17
Shmt1P50431 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.12■□□□□ 0.17
Shmt1P50431 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shmt1P50431 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.11■□□□□ 0.17
Shmt1P50431 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.11■□□□□ 0.17
Shmt1P50431 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.11■□□□□ 0.17
Shmt1P50431 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.11■□□□□ 0.17
Shmt1P50431 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Mir8117-201ENSMUST00000184773 107 ntBASIC16.11■□□□□ 0.17
Shmt1P50431 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Gm45747-201ENSMUST00000212203 999 ntBASIC16.11■□□□□ 0.17
Shmt1P50431 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Shmt1P50431 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.11■□□□□ 0.17
Shmt1P50431 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Shmt1P50431 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shmt1P50431 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shmt1P50431 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shmt1P50431 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shmt1P50431 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shmt1P50431 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Shmt1P50431 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.1■□□□□ 0.17
Shmt1P50431 Gm23935-201ENSMUST00000102303 57 ntBASIC16.1■□□□□ 0.17
Shmt1P50431 Gm24270-201ENSMUST00000102326 57 ntBASIC16.1■□□□□ 0.17
Shmt1P50431 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.1■□□□□ 0.17
Shmt1P50431 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.1■□□□□ 0.17
Shmt1P50431 Gm24245-201ENSMUST00000157318 57 ntBASIC16.1■□□□□ 0.17
Shmt1P50431 Gm44492-201ENSMUST00000197012 141 ntBASIC16.1■□□□□ 0.17
Shmt1P50431 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shmt1P50431 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shmt1P50431 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms