Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SftpbP50405 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.67■□□□□ 0.1
SftpbP50405 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SftpbP50405 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SftpbP50405 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SftpbP50405 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SftpbP50405 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.67■□□□□ 0.1
SftpbP50405 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.67■□□□□ 0.1
SftpbP50405 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.67■□□□□ 0.1
SftpbP50405 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SftpbP50405 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.66■□□□□ 0.1
SftpbP50405 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.66■□□□□ 0.1
SftpbP50405 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Gm9172-201ENSMUST00000212092 954 ntBASIC15.66■□□□□ 0.1
SftpbP50405 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.66■□□□□ 0.1
SftpbP50405 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.66■□□□□ 0.1
SftpbP50405 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
SftpbP50405 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Efs-202ENSMUST00000227037 2540 ntBASIC15.66■□□□□ 0.1
SftpbP50405 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SftpbP50405 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SftpbP50405 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.66■□□□□ 0.1
SftpbP50405 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
SftpbP50405 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SftpbP50405 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.65■□□□□ 0.1
SftpbP50405 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.65■□□□□ 0.1
SftpbP50405 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.65■□□□□ 0.1
SftpbP50405 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SftpbP50405 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SftpbP50405 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SftpbP50405 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.65■□□□□ 0.1
SftpbP50405 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SftpbP50405 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.65■□□□□ 0.1
SftpbP50405 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
SftpbP50405 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SftpbP50405 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SftpbP50405 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SftpbP50405 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SftpbP50405 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SftpbP50405 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SftpbP50405 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms