Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-1P50220 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm10052-201ENSMUST00000168019 960 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm7729-201ENSMUST00000050143 801 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.69□□□□□ -0.38
Nkx2-1P50220 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-1P50220 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm26039-201ENSMUST00000158152 144 ntBASIC12.68□□□□□ -0.38
Nkx2-1P50220 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm27389-201ENSMUST00000183622 195 ntBASIC12.68□□□□□ -0.38
Nkx2-1P50220 Mir6404-201ENSMUST00000183699 94 ntBASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm44430-201ENSMUST00000203376 995 ntBASIC12.68□□□□□ -0.38
Nkx2-1P50220 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Nkx2-1P50220 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms