Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Brca1P48754 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Brca1P48754 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Brca1P48754 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.95■□□□□ 0.3
Brca1P48754 Gm13464-201ENSMUST00000119418 935 ntBASIC16.95■□□□□ 0.3
Brca1P48754 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.95■□□□□ 0.3
Brca1P48754 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.95■□□□□ 0.3
Brca1P48754 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Brca1P48754 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Brca1P48754 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Brca1P48754 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Brca1P48754 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.94■□□□□ 0.3
Brca1P48754 Gm18624-201ENSMUST00000220966 658 ntBASIC16.94■□□□□ 0.3
Brca1P48754 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Brca1P48754 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.94■□□□□ 0.3
Brca1P48754 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Brca1P48754 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Brca1P48754 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Brca1P48754 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.93■□□□□ 0.3
Brca1P48754 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.93■□□□□ 0.3
Brca1P48754 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.93■□□□□ 0.3
Brca1P48754 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.93■□□□□ 0.3
Brca1P48754 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brca1P48754 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brca1P48754 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.93■□□□□ 0.3
Brca1P48754 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Brca1P48754 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Brca1P48754 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Brca1P48754 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.93■□□□□ 0.3
Brca1P48754 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Brca1P48754 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Brca1P48754 Gm20445-201ENSMUST00000061905 565 ntBASIC16.92■□□□□ 0.3
Brca1P48754 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Brca1P48754 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Brca1P48754 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
Brca1P48754 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Brca1P48754 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brca1P48754 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Brca1P48754 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.91■□□□□ 0.3
Brca1P48754 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms