Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Rfx3P48381 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfx3P48381 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Rfx3P48381 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm8825-201ENSMUST00000182565 998 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm4518-201ENSMUST00000182638 718 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.82□□□□□ -0.2
Rfx3P48381 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.82□□□□□ -0.2
Rfx3P48381 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Rfx3P48381 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.82□□□□□ -0.2
Rfx3P48381 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rfx3P48381 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.81□□□□□ -0.2
Rfx3P48381 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Rfx3P48381 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rfx3P48381 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.81□□□□□ -0.2
Rfx3P48381 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.81□□□□□ -0.2
Rfx3P48381 Gm10819-201ENSMUST00000099988 561 ntBASIC13.81□□□□□ -0.2
Rfx3P48381 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Rfx3P48381 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rfx3P48381 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.81□□□□□ -0.2
Rfx3P48381 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rfx3P48381 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Rfx3P48381 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rfx3P48381 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rfx3P48381 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms