Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.65□□□□□ -0.38
Rplp1P47955 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.65□□□□□ -0.38
Rplp1P47955 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Mir8098-201ENSMUST00000184011 137 ntBASIC12.65□□□□□ -0.38
Rplp1P47955 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Gm5864-201ENSMUST00000202263 970 ntBASIC12.65□□□□□ -0.38
Rplp1P47955 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rplp1P47955 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rplp1P47955 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rplp1P47955 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rplp1P47955 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rplp1P47955 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rplp1P47955 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Rplp1P47955 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.64□□□□□ -0.39
Rplp1P47955 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Rplp1P47955 Gm6754-201ENSMUST00000117124 913 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Mir6404-201ENSMUST00000183699 94 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 Gm7506-201ENSMUST00000207758 815 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rplp1P47955 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rplp1P47955 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Asic1-205ENSMUST00000228185 1818 ntBASIC12.64□□□□□ -0.39
Rplp1P47955 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rplp1P47955 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rplp1P47955 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rplp1P47955 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rplp1P47955 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.63□□□□□ -0.39
Rplp1P47955 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.63□□□□□ -0.39
Rplp1P47955 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.63□□□□□ -0.39
Rplp1P47955 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.63□□□□□ -0.39
Rplp1P47955 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.63□□□□□ -0.39
Rplp1P47955 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Rplp1P47955 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.63□□□□□ -0.39
Rplp1P47955 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rplp1P47955 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rplp1P47955 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms