Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Sdc2P43407 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sdc2P43407 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Sdc2P43407 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdc2P43407 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Sdc2P43407 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc2P43407 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc2P43407 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.16■□□□□ 0.34
Sdc2P43407 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Sdc2P43407 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdc2P43407 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Gm14859-201ENSMUST00000117752 357 ntBASIC17.15■□□□□ 0.34
Sdc2P43407 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.15■□□□□ 0.34
Sdc2P43407 Gm8655-201ENSMUST00000221159 852 ntBASIC17.15■□□□□ 0.34
Sdc2P43407 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sdc2P43407 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdc2P43407 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sdc2P43407 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdc2P43407 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdc2P43407 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdc2P43407 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.14■□□□□ 0.34
Sdc2P43407 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sdc2P43407 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.14■□□□□ 0.33
Sdc2P43407 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sdc2P43407 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.14■□□□□ 0.33
Sdc2P43407 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sdc2P43407 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdc2P43407 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.14■□□□□ 0.33
Sdc2P43407 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sdc2P43407 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sdc2P43407 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdc2P43407 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdc2P43407 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sdc2P43407 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Gm12895-201ENSMUST00000122214 226 ntBASIC17.13■□□□□ 0.33
Sdc2P43407 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.13■□□□□ 0.33
Sdc2P43407 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.13■□□□□ 0.33
Sdc2P43407 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.13■□□□□ 0.33
Sdc2P43407 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdc2P43407 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms