Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.72□□□□□ -0.37
Abca1P41233 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.72□□□□□ -0.37
Abca1P41233 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Abca1P41233 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Abca1P41233 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.71□□□□□ -0.37
Abca1P41233 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.71□□□□□ -0.37
Abca1P41233 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Mir1895-201ENSMUST00000122615 79 ntBASIC12.71□□□□□ -0.37
Abca1P41233 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Abca1P41233 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.71□□□□□ -0.37
Abca1P41233 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Abca1P41233 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.71□□□□□ -0.38
Abca1P41233 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Gm15358-201ENSMUST00000119249 520 ntBASIC12.71□□□□□ -0.38
Abca1P41233 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.71□□□□□ -0.38
Abca1P41233 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Abca1P41233 Gm43438-201ENSMUST00000198133 379 ntBASIC12.71□□□□□ -0.38
Abca1P41233 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Abca1P41233 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.71□□□□□ -0.38
Abca1P41233 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Abca1P41233 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Abca1P41233 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Abca1P41233 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Abca1P41233 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
Abca1P41233 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Abca1P41233 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Abca1P41233 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Abca1P41233 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Abca1P41233 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms