Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TfamP40630 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TfamP40630 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TfamP40630 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TfamP40630 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TfamP40630 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Gm4459-201ENSMUST00000118750 468 ntBASIC14.83□□□□□ -0.04
TfamP40630 Gm14722-201ENSMUST00000118943 689 ntBASIC14.83□□□□□ -0.04
TfamP40630 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.83□□□□□ -0.04
TfamP40630 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Grk6-207ENSMUST00000225925 2769 ntBASIC14.83□□□□□ -0.04
TfamP40630 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TfamP40630 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.83□□□□□ -0.04
TfamP40630 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.82□□□□□ -0.04
TfamP40630 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Gm15372-201ENSMUST00000120729 834 ntBASIC14.82□□□□□ -0.04
TfamP40630 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.82□□□□□ -0.04
TfamP40630 Gm12497-201ENSMUST00000138778 237 ntBASIC14.82□□□□□ -0.04
TfamP40630 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.82□□□□□ -0.04
TfamP40630 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TfamP40630 Gm27357-201ENSMUST00000183754 135 ntBASIC14.82□□□□□ -0.04
TfamP40630 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
TfamP40630 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.82□□□□□ -0.04
TfamP40630 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TfamP40630 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TfamP40630 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TfamP40630 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TfamP40630 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TfamP40630 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TfamP40630 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
TfamP40630 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TfamP40630 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.81□□□□□ -0.04
TfamP40630 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.81□□□□□ -0.04
TfamP40630 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.81□□□□□ -0.04
TfamP40630 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TfamP40630 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TfamP40630 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TfamP40630 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TfamP40630 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.8□□□□□ -0.04
TfamP40630 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms