Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdh4P39038 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.63□□□□□ -0.07
Cdh4P39038 Gm27628-201ENSMUST00000184911 107 ntBASIC14.63□□□□□ -0.07
Cdh4P39038 Gm9682-201ENSMUST00000197505 556 ntBASIC14.63□□□□□ -0.07
Cdh4P39038 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.63□□□□□ -0.07
Cdh4P39038 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.63□□□□□ -0.07
Cdh4P39038 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh4P39038 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdh4P39038 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh4P39038 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh4P39038 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Cdh4P39038 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdh4P39038 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdh4P39038 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Gm8318-201ENSMUST00000182954 872 ntBASIC14.62□□□□□ -0.07
Cdh4P39038 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdh4P39038 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.62□□□□□ -0.07
Cdh4P39038 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.62□□□□□ -0.07
Cdh4P39038 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cdh4P39038 Gm6443-201ENSMUST00000203599 874 ntBASIC14.62□□□□□ -0.07
Cdh4P39038 Gm45167-201ENSMUST00000208007 322 ntBASIC14.62□□□□□ -0.07
Cdh4P39038 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.62□□□□□ -0.07
Cdh4P39038 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh4P39038 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdh4P39038 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cdh4P39038 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.61□□□□□ -0.07
Cdh4P39038 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Gm1401-201ENSMUST00000122048 772 ntBASIC14.61□□□□□ -0.07
Cdh4P39038 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.61□□□□□ -0.07
Cdh4P39038 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.61□□□□□ -0.07
Cdh4P39038 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdh4P39038 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.61□□□□□ -0.07
Cdh4P39038 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.61□□□□□ -0.07
Cdh4P39038 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh4P39038 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Cdh4P39038 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.6□□□□□ -0.07
Cdh4P39038 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.6□□□□□ -0.07
Cdh4P39038 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.6□□□□□ -0.07
Cdh4P39038 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Gm18206-201ENSMUST00000207027 926 ntBASIC14.6□□□□□ -0.07
Cdh4P39038 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms