Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk2P38575 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk2P38575 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk2P38575 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Upk2P38575 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.4□□□□□ -0.26
Upk2P38575 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Upk2P38575 Gm7153-201ENSMUST00000117092 455 ntBASIC13.4□□□□□ -0.26
Upk2P38575 Gm7222-201ENSMUST00000117512 906 ntBASIC13.4□□□□□ -0.26
Upk2P38575 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.4□□□□□ -0.26
Upk2P38575 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.4□□□□□ -0.26
Upk2P38575 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.4□□□□□ -0.26
Upk2P38575 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Upk2P38575 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk2P38575 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk2P38575 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk2P38575 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk2P38575 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Upk2P38575 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Upk2P38575 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.4□□□□□ -0.27
Upk2P38575 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Upk2P38575 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Upk2P38575 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.39□□□□□ -0.27
Upk2P38575 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk2P38575 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk2P38575 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk2P38575 Gm37153-201ENSMUST00000193637 231 ntBASIC13.39□□□□□ -0.27
Upk2P38575 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.39□□□□□ -0.27
Upk2P38575 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Upk2P38575 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk2P38575 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Upk2P38575 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Upk2P38575 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk2P38575 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk2P38575 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Upk2P38575 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk2P38575 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Upk2P38575 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk2P38575 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk2P38575 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.38□□□□□ -0.27
Upk2P38575 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk2P38575 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Gm7862-201ENSMUST00000121461 292 ntBASIC13.38□□□□□ -0.27
Upk2P38575 Gm7230-201ENSMUST00000173026 815 ntBASIC13.38□□□□□ -0.27
Upk2P38575 Gm5682-201ENSMUST00000173402 505 ntBASIC13.38□□□□□ -0.27
Upk2P38575 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Upk2P38575 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.38□□□□□ -0.27
Upk2P38575 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk2P38575 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms