Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.65■□□□□ 0.1
Mmp13P33435 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Mmp13P33435 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.65■□□□□ 0.1
Mmp13P33435 Gm28659-201ENSMUST00000188013 759 ntBASIC15.65■□□□□ 0.1
Mmp13P33435 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.65■□□□□ 0.1
Mmp13P33435 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Gm7461-201ENSMUST00000058918 827 ntBASIC15.65■□□□□ 0.1
Mmp13P33435 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.65■□□□□ 0.1
Mmp13P33435 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Mmp13P33435 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.64■□□□□ 0.1
Mmp13P33435 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Mmp13P33435 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Mmp13P33435 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.64■□□□□ 0.09
Mmp13P33435 Gm25745-201ENSMUST00000174945 133 ntBASIC15.64■□□□□ 0.09
Mmp13P33435 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Mmp13P33435 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.64■□□□□ 0.09
Mmp13P33435 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.64■□□□□ 0.09
Mmp13P33435 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Mmp13P33435 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Mmp13P33435 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.64■□□□□ 0.09
Mmp13P33435 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Mmp13P33435 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Mmp13P33435 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.63■□□□□ 0.09
Mmp13P33435 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Mmp13P33435 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Mmp13P33435 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Mmp13P33435 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Mmp13P33435 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.63■□□□□ 0.09
Mmp13P33435 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.63■□□□□ 0.09
Mmp13P33435 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.63■□□□□ 0.09
Mmp13P33435 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.63■□□□□ 0.09
Mmp13P33435 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Mmp13P33435 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Mmp13P33435 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Mmp13P33435 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Mmp13P33435 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Mmp13P33435 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Mmp13P33435 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.62■□□□□ 0.09
Mmp13P33435 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Mmp13P33435 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Mmp13P33435 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.62■□□□□ 0.09
Mmp13P33435 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms