Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.67□□□□□ -0.38
Tnfsf8P32972 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf8P32972 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.66□□□□□ -0.38
Tnfsf8P32972 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm17808-201ENSMUST00000200859 894 ntBASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm45328-201ENSMUST00000210942 917 ntBASIC12.66□□□□□ -0.38
Tnfsf8P32972 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm7367-201ENSMUST00000057611 492 ntBASIC12.66□□□□□ -0.38
Tnfsf8P32972 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf8P32972 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.65□□□□□ -0.38
Tnfsf8P32972 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.65□□□□□ -0.38
Tnfsf8P32972 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tnfsf8P32972 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf8P32972 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
Tnfsf8P32972 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf8P32972 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf8P32972 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Tnfsf8P32972 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf8P32972 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.64□□□□□ -0.39
Tnfsf8P32972 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.64□□□□□ -0.39
Tnfsf8P32972 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Tnfsf8P32972 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.64□□□□□ -0.39
Tnfsf8P32972 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms