Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc5P32043 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc5P32043 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxc5P32043 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc5P32043 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc5P32043 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc5P32043 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc5P32043 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc5P32043 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Gm4459-201ENSMUST00000118750 468 ntBASIC14.2□□□□□ -0.14
Hoxc5P32043 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Gm18622-201ENSMUST00000219361 595 ntBASIC14.2□□□□□ -0.14
Hoxc5P32043 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Hoxc5P32043 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc5P32043 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.19□□□□□ -0.14
Hoxc5P32043 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Gm12895-201ENSMUST00000122214 226 ntBASIC14.19□□□□□ -0.14
Hoxc5P32043 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Gm27357-201ENSMUST00000183754 135 ntBASIC14.19□□□□□ -0.14
Hoxc5P32043 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.19□□□□□ -0.14
Hoxc5P32043 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.19□□□□□ -0.14
Hoxc5P32043 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxc5P32043 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxc5P32043 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Hoxc5P32043 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxc5P32043 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxc5P32043 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxc5P32043 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms