Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Slc6a1P31648 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a1P31648 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.19□□□□□ -0.3
Slc6a1P31648 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a1P31648 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.19□□□□□ -0.3
Slc6a1P31648 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a1P31648 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.19□□□□□ -0.3
Slc6a1P31648 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a1P31648 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Slc6a1P31648 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a1P31648 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.19□□□□□ -0.3
Slc6a1P31648 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Slc6a1P31648 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Slc6a1P31648 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Slc6a1P31648 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Slc6a1P31648 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.17□□□□□ -0.3
Slc6a1P31648 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.17□□□□□ -0.3
Slc6a1P31648 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.17□□□□□ -0.3
Slc6a1P31648 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.17□□□□□ -0.3
Slc6a1P31648 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc6a1P31648 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.17□□□□□ -0.3
Slc6a1P31648 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Slc6a1P31648 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Slc6a1P31648 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.16□□□□□ -0.3
Slc6a1P31648 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.16□□□□□ -0.3
Slc6a1P31648 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Slc6a1P31648 Gm9013-201ENSMUST00000132939 882 ntBASIC13.16□□□□□ -0.3
Slc6a1P31648 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms