Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PdgfbP31240 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PdgfbP31240 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PdgfbP31240 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.21■□□□□ 0.03
PdgfbP31240 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PdgfbP31240 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PdgfbP31240 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PdgfbP31240 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
PdgfbP31240 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.21■□□□□ 0.03
PdgfbP31240 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PdgfbP31240 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
PdgfbP31240 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.2■□□□□ 0.02
PdgfbP31240 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm24543-201ENSMUST00000103867 82 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.2■□□□□ 0.02
PdgfbP31240 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PdgfbP31240 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
PdgfbP31240 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 Gm8515-201ENSMUST00000194852 576 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 Gm9908-201ENSMUST00000211534 448 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.2■□□□□ 0.02
PdgfbP31240 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.2■□□□□ 0.02
PdgfbP31240 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.2■□□□□ 0.02
PdgfbP31240 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PdgfbP31240 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PdgfbP31240 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.19■□□□□ 0.02
PdgfbP31240 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PdgfbP31240 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.19■□□□□ 0.02
PdgfbP31240 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PdgfbP31240 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm11478-201ENSMUST00000117851 599 ntBASIC15.19■□□□□ 0.02
PdgfbP31240 Gm14042-201ENSMUST00000120139 833 ntBASIC15.19■□□□□ 0.02
PdgfbP31240 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.19■□□□□ 0.02
PdgfbP31240 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.19■□□□□ 0.02
PdgfbP31240 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm8602-201ENSMUST00000184045 607 ntBASIC15.19■□□□□ 0.02
PdgfbP31240 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.19■□□□□ 0.02
PdgfbP31240 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.19■□□□□ 0.02
PdgfbP31240 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PdgfbP31240 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PdgfbP31240 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.19■□□□□ 0.02
PdgfbP31240 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.19■□□□□ 0.02
PdgfbP31240 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PdgfbP31240 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.18■□□□□ 0.02
PdgfbP31240 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms