Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.17■□□□□ 0.34
Col2a1P28481 Gm13453-201ENSMUST00000118708 357 ntBASIC17.17■□□□□ 0.34
Col2a1P28481 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Olfr286-202ENSMUST00000205305 969 ntBASIC17.17■□□□□ 0.34
Col2a1P28481 Gm45098-201ENSMUST00000207179 657 ntBASIC17.17■□□□□ 0.34
Col2a1P28481 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.17■□□□□ 0.34
Col2a1P28481 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col2a1P28481 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Col2a1P28481 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Col2a1P28481 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Col2a1P28481 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Col2a1P28481 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.16■□□□□ 0.34
Col2a1P28481 Gm27321-201ENSMUST00000185021 205 ntBASIC17.16■□□□□ 0.34
Col2a1P28481 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Col2a1P28481 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col2a1P28481 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
Col2a1P28481 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col2a1P28481 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col2a1P28481 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.15■□□□□ 0.34
Col2a1P28481 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Col2a1P28481 Gm9719-201ENSMUST00000162765 543 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col2a1P28481 Gm27533-201ENSMUST00000183800 152 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm29310-201ENSMUST00000185468 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21825-201ENSMUST00000185728 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm29109-201ENSMUST00000185895 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21896-201ENSMUST00000186520 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21873-201ENSMUST00000186728 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21794-201ENSMUST00000187056 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21880-201ENSMUST00000187275 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21826-201ENSMUST00000187451 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21198-201ENSMUST00000188393 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21749-201ENSMUST00000189343 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21901-201ENSMUST00000189568 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm29424-201ENSMUST00000189716 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm28599-201ENSMUST00000189838 694 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21867-201ENSMUST00000189917 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm29269-201ENSMUST00000190087 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21722-201ENSMUST00000190153 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm28423-201ENSMUST00000190701 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21899-201ENSMUST00000190745 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21910-201ENSMUST00000191163 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21849-201ENSMUST00000191571 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm28678-201ENSMUST00000191593 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm20910-201ENSMUST00000193268 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Gm21871-201ENSMUST00000194621 696 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.15■□□□□ 0.34
Col2a1P28481 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col2a1P28481 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col2a1P28481 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col2a1P28481 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col2a1P28481 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col2a1P28481 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Col2a1P28481 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.14■□□□□ 0.33
Col2a1P28481 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col2a1P28481 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.14■□□□□ 0.33
Col2a1P28481 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.14■□□□□ 0.33
Col2a1P28481 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms