Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6aP27664 Celf4-206ENSMUST00000224553 1729 ntBASIC17.69■□□□□ 0.42
Pde6aP27664 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.69■□□□□ 0.42
Pde6aP27664 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.69■□□□□ 0.42
Pde6aP27664 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pde6aP27664 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pde6aP27664 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.69■□□□□ 0.42
Pde6aP27664 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.69■□□□□ 0.42
Pde6aP27664 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Pde6aP27664 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Pde6aP27664 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6aP27664 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6aP27664 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.68■□□□□ 0.42
Pde6aP27664 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.68■□□□□ 0.42
Pde6aP27664 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pde6aP27664 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Pde6aP27664 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6aP27664 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pde6aP27664 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Pde6aP27664 Gm9727-201ENSMUST00000161387 555 ntBASIC17.67■□□□□ 0.42
Pde6aP27664 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.67■□□□□ 0.42
Pde6aP27664 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pde6aP27664 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.67■□□□□ 0.42
Pde6aP27664 Gm6443-201ENSMUST00000203599 874 ntBASIC17.67■□□□□ 0.42
Pde6aP27664 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pde6aP27664 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.67■□□□□ 0.42
Pde6aP27664 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pde6aP27664 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6aP27664 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.66■□□□□ 0.42
Pde6aP27664 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.66■□□□□ 0.42
Pde6aP27664 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pde6aP27664 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.66■□□□□ 0.42
Pde6aP27664 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pde6aP27664 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Pde6aP27664 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pde6aP27664 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pde6aP27664 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6aP27664 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms