Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tnfrsf1aP25118 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gm12895-201ENSMUST00000122214 226 ntBASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gm17807-201ENSMUST00000186869 298 ntBASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Gm7506-201ENSMUST00000207758 815 ntBASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Tnfrsf1aP25118 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Gm12644-201ENSMUST00000119935 606 ntBASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Gm8655-201ENSMUST00000221159 852 ntBASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1aP25118 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms