Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Gm40377-201ENSMUST00000204604 2015 ntBASIC14.25□□□□□ -0.13
Clk1P22518 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.25□□□□□ -0.13
Clk1P22518 Birc2-201ENSMUST00000054878 378 ntBASIC14.25□□□□□ -0.13
Clk1P22518 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clk1P22518 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Clk1P22518 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clk1P22518 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clk1P22518 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Clk1P22518 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.24□□□□□ -0.13
Clk1P22518 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk1P22518 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.24□□□□□ -0.13
Clk1P22518 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk1P22518 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.24□□□□□ -0.13
Clk1P22518 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.24□□□□□ -0.13
Clk1P22518 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.24□□□□□ -0.13
Clk1P22518 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.24□□□□□ -0.13
Clk1P22518 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Clk1P22518 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Clk1P22518 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clk1P22518 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.23□□□□□ -0.13
Clk1P22518 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.23□□□□□ -0.13
Clk1P22518 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Gm4459-201ENSMUST00000118750 468 ntBASIC14.23□□□□□ -0.13
Clk1P22518 Gm8344-201ENSMUST00000119813 856 ntBASIC14.23□□□□□ -0.13
Clk1P22518 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.23□□□□□ -0.13
Clk1P22518 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Clk1P22518 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.23□□□□□ -0.13
Clk1P22518 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.23□□□□□ -0.13
Clk1P22518 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Clk1P22518 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.23□□□□□ -0.13
Clk1P22518 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Clk1P22518 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Clk1P22518 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms