Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Kcna1P16388 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Kcna1P16388 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.31■□□□□ 0.36
Kcna1P16388 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Gm44492-201ENSMUST00000197012 141 ntBASIC17.31■□□□□ 0.36
Kcna1P16388 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Kcna1P16388 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.31■□□□□ 0.36
Kcna1P16388 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Kcna1P16388 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Kcna1P16388 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Kcna1P16388 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Kcna1P16388 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.3■□□□□ 0.36
Kcna1P16388 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Kcna1P16388 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.3■□□□□ 0.36
Kcna1P16388 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Kcna1P16388 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.3■□□□□ 0.36
Kcna1P16388 Mir8117-201ENSMUST00000184773 107 ntBASIC17.3■□□□□ 0.36
Kcna1P16388 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Kcna1P16388 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Kcna1P16388 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Kcna1P16388 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.29■□□□□ 0.36
Kcna1P16388 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.29■□□□□ 0.36
Kcna1P16388 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.29■□□□□ 0.36
Kcna1P16388 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Kcna1P16388 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Kcna1P16388 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Kcna1P16388 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Kcna1P16388 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Kcna1P16388 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Kcna1P16388 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.28■□□□□ 0.36
Kcna1P16388 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.28■□□□□ 0.36
Kcna1P16388 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.28■□□□□ 0.36
Kcna1P16388 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Kcna1P16388 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms