Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.64■□□□□ 0.41
Usp53P15975 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Usp53P15975 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp53P15975 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.63■□□□□ 0.41
Usp53P15975 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.63■□□□□ 0.41
Usp53P15975 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.63■□□□□ 0.41
Usp53P15975 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.63■□□□□ 0.41
Usp53P15975 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Usp53P15975 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Usp53P15975 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Usp53P15975 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Usp53P15975 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp53P15975 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp53P15975 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.62■□□□□ 0.41
Usp53P15975 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.62■□□□□ 0.41
Usp53P15975 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.62■□□□□ 0.41
Usp53P15975 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.62■□□□□ 0.41
Usp53P15975 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Usp53P15975 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.61■□□□□ 0.41
Usp53P15975 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Usp53P15975 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Usp53P15975 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Usp53P15975 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Usp53P15975 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Usp53P15975 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Usp53P15975 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Usp53P15975 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.6■□□□□ 0.41
Usp53P15975 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms