Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.66□□□□□ -0.06
Cntn1P12960 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.65□□□□□ -0.06
Cntn1P12960 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cntn1P12960 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cntn1P12960 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Cntn1P12960 Mir8117-201ENSMUST00000184773 107 ntBASIC14.65□□□□□ -0.06
Cntn1P12960 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.65□□□□□ -0.06
Cntn1P12960 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Cntn1P12960 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cntn1P12960 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.65□□□□□ -0.06
Cntn1P12960 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cntn1P12960 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cntn1P12960 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cntn1P12960 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.64□□□□□ -0.07
Cntn1P12960 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.64□□□□□ -0.07
Cntn1P12960 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Gm18246-201ENSMUST00000221023 728 ntBASIC14.64□□□□□ -0.07
Cntn1P12960 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.64□□□□□ -0.07
Cntn1P12960 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.64□□□□□ -0.07
Cntn1P12960 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cntn1P12960 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cntn1P12960 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.63□□□□□ -0.07
Cntn1P12960 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Gm25911-201ENSMUST00000157621 56 ntBASIC14.63□□□□□ -0.07
Cntn1P12960 Gm10499-201ENSMUST00000174094 934 ntBASIC14.63□□□□□ -0.07
Cntn1P12960 Gm27702-201ENSMUST00000184512 56 ntBASIC14.63□□□□□ -0.07
Cntn1P12960 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.63□□□□□ -0.07
Cntn1P12960 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms