Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm27306-201ENSMUST00000183970 107 ntBASIC13.45□□□□□ -0.26
Ccl3P10855 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.45□□□□□ -0.26
Ccl3P10855 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.45□□□□□ -0.26
Ccl3P10855 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.45□□□□□ -0.26
Ccl3P10855 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.45□□□□□ -0.26
Ccl3P10855 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ccl3P10855 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ccl3P10855 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Ccl3P10855 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccl3P10855 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.44□□□□□ -0.26
Ccl3P10855 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Gm5745-201ENSMUST00000183748 313 ntBASIC13.44□□□□□ -0.26
Ccl3P10855 Gm27989-201ENSMUST00000184721 107 ntBASIC13.44□□□□□ -0.26
Ccl3P10855 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.44□□□□□ -0.26
Ccl3P10855 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Ccl3P10855 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.44□□□□□ -0.26
Ccl3P10855 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccl3P10855 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccl3P10855 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.43□□□□□ -0.26
Ccl3P10855 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.43□□□□□ -0.26
Ccl3P10855 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Gm6888-201ENSMUST00000221983 706 ntBASIC13.43□□□□□ -0.26
Ccl3P10855 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccl3P10855 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccl3P10855 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ccl3P10855 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms