Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.92■□□□□ 0.3
Hoxc6P10629 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hoxc6P10629 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.92■□□□□ 0.3
Hoxc6P10629 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hoxc6P10629 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm25144-201ENSMUST00000179561 110 ntBASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm25352-201ENSMUST00000179815 110 ntBASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm17837-201ENSMUST00000186435 985 ntBASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm29541-201ENSMUST00000191351 678 ntBASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm38294-201ENSMUST00000192831 381 ntBASIC16.91■□□□□ 0.3
Hoxc6P10629 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hoxc6P10629 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hoxc6P10629 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.9■□□□□ 0.3
Hoxc6P10629 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.9■□□□□ 0.3
Hoxc6P10629 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hoxc6P10629 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hoxc6P10629 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.89■□□□□ 0.3
Hoxc6P10629 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.89■□□□□ 0.29
Hoxc6P10629 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.89■□□□□ 0.29
Hoxc6P10629 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.89■□□□□ 0.29
Hoxc6P10629 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.89■□□□□ 0.29
Hoxc6P10629 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.89■□□□□ 0.29
Hoxc6P10629 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hoxc6P10629 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hoxc6P10629 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Gm13015-201ENSMUST00000118674 204 ntBASIC16.88■□□□□ 0.29
Hoxc6P10629 Gm11424-201ENSMUST00000121929 829 ntBASIC16.88■□□□□ 0.29
Hoxc6P10629 Gm6888-201ENSMUST00000221983 706 ntBASIC16.88■□□□□ 0.29
Hoxc6P10629 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Hoxc6P10629 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms