Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxc9P09633 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxc9P09633 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxc9P09633 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxc9P09633 Gm8410-201ENSMUST00000117225 605 ntBASIC19.71■□□□□ 0.75
Hoxc9P09633 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.71■□□□□ 0.75
Hoxc9P09633 Gm43767-201ENSMUST00000198933 381 ntBASIC19.71■□□□□ 0.75
Hoxc9P09633 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.71■□□□□ 0.75
Hoxc9P09633 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxc9P09633 App-207ENSMUST00000227737 2827 ntBASIC19.71■□□□□ 0.75
Hoxc9P09633 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.71■□□□□ 0.75
Hoxc9P09633 Celf4-206ENSMUST00000224553 1729 ntBASIC19.71■□□□□ 0.75
Hoxc9P09633 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxc9P09633 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc9P09633 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc9P09633 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxc9P09633 Gm23547-201ENSMUST00000158210 271 ntBASIC19.7■□□□□ 0.74
Hoxc9P09633 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc9P09633 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxc9P09633 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Hoxc9P09633 Gm25144-201ENSMUST00000179561 110 ntBASIC19.69■□□□□ 0.74
Hoxc9P09633 Gm25352-201ENSMUST00000179815 110 ntBASIC19.69■□□□□ 0.74
Hoxc9P09633 Ighv8-7-201ENSMUST00000194349 297 ntBASIC19.69■□□□□ 0.74
Hoxc9P09633 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc9P09633 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Hoxc9P09633 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Mir8102-201ENSMUST00000184148 139 ntBASIC19.68■□□□□ 0.74
Hoxc9P09633 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.68■□□□□ 0.74
Hoxc9P09633 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.68■□□□□ 0.74
Hoxc9P09633 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc9P09633 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxc9P09633 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.67■□□□□ 0.74
Hoxc9P09633 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hoxc9P09633 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms