Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
NefmP08553 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
NefmP08553 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 Olfr129-201ENSMUST00000122318 993 ntBASIC22.58■■□□□ 1.21
NefmP08553 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
NefmP08553 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC22.58■■□□□ 1.21
NefmP08553 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NefmP08553 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
NefmP08553 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
NefmP08553 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NefmP08553 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
NefmP08553 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
NefmP08553 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
NefmP08553 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NefmP08553 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.57■■□□□ 1.2
NefmP08553 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NefmP08553 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC22.57■■□□□ 1.2
NefmP08553 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
NefmP08553 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC22.56■■□□□ 1.2
NefmP08553 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
NefmP08553 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC22.56■■□□□ 1.2
NefmP08553 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC22.56■■□□□ 1.2
NefmP08553 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC22.56■■□□□ 1.2
NefmP08553 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NefmP08553 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NefmP08553 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC22.56■■□□□ 1.2
NefmP08553 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NefmP08553 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NefmP08553 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NefmP08553 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NefmP08553 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC22.55■■□□□ 1.2
NefmP08553 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC22.55■■□□□ 1.2
NefmP08553 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC22.55■■□□□ 1.2
NefmP08553 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NefmP08553 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NefmP08553 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC22.54■■□□□ 1.2
NefmP08553 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC22.54■■□□□ 1.2
NefmP08553 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NefmP08553 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC22.54■■□□□ 1.2
NefmP08553 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NefmP08553 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC22.54■■□□□ 1.2
NefmP08553 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms