Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.58■□□□□ 0.56
Col4a1P02463 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a1P02463 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.57■□□□□ 0.56
Col4a1P02463 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Col4a1P02463 Gm15321-201ENSMUST00000121290 288 ntBASIC18.57■□□□□ 0.56
Col4a1P02463 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Dupd1-202ENSMUST00000224735 548 ntBASIC18.57■□□□□ 0.56
Col4a1P02463 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col4a1P02463 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a1P02463 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col4a1P02463 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Col4a1P02463 Gm14767-201ENSMUST00000121559 586 ntBASIC18.57■□□□□ 0.56
Col4a1P02463 Shd-206ENSMUST00000225145 998 ntBASIC18.57■□□□□ 0.56
Col4a1P02463 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.56■□□□□ 0.56
Col4a1P02463 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col4a1P02463 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Col4a1P02463 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.56■□□□□ 0.56
Col4a1P02463 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Col4a1P02463 Gm24543-201ENSMUST00000103867 82 ntBASIC18.56■□□□□ 0.56
Col4a1P02463 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a1P02463 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Col4a1P02463 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col4a1P02463 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Gm7488-201ENSMUST00000117148 684 ntBASIC18.55■□□□□ 0.56
Col4a1P02463 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Col4a1P02463 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.55■□□□□ 0.56
Col4a1P02463 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.55■□□□□ 0.56
Col4a1P02463 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.55■□□□□ 0.56
Col4a1P02463 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a1P02463 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm13464-201ENSMUST00000119418 935 ntBASIC18.54■□□□□ 0.56
Col4a1P02463 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC18.54■□□□□ 0.56
Col4a1P02463 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Hist1h2al-201ENSMUST00000091708 339 ntBASIC18.54■□□□□ 0.56
Col4a1P02463 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col4a1P02463 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Col4a1P02463 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
Col4a1P02463 Prob1-201ENSMUST00000097619 3021 ntBASIC18.54■□□□□ 0.56
Col4a1P02463 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.54■□□□□ 0.56
Col4a1P02463 Gm29667-201ENSMUST00000190817 490 ntBASIC18.54■□□□□ 0.56
Col4a1P02463 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Col4a1P02463 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a1P02463 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.53■□□□□ 0.56
Col4a1P02463 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a1P02463 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms