Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Gm7820-201ENSMUST00000121012 1052 ntBASIC20.05■□□□□ 0.8
Tom1O88746 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.05■□□□□ 0.8
Tom1O88746 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC20.05■□□□□ 0.8
Tom1O88746 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Tom1O88746 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Tom1O88746 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tom1O88746 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.05■□□□□ 0.8
Tom1O88746 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tom1O88746 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tom1O88746 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.04■□□□□ 0.8
Tom1O88746 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Rn7s1-201ENSMUST00000174924 300 ntBASIC20.04■□□□□ 0.8
Tom1O88746 Rn7s2-201ENSMUST00000175032 300 ntBASIC20.04■□□□□ 0.8
Tom1O88746 Gm26461-201ENSMUST00000175064 290 ntBASIC20.04■□□□□ 0.8
Tom1O88746 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.04■□□□□ 0.8
Tom1O88746 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.04■□□□□ 0.8
Tom1O88746 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.04■□□□□ 0.8
Tom1O88746 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tom1O88746 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC20.03■□□□□ 0.8
Tom1O88746 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Tom1O88746 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tom1O88746 Gm29310-201ENSMUST00000185468 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21825-201ENSMUST00000185728 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm29109-201ENSMUST00000185895 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21896-201ENSMUST00000186520 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21873-201ENSMUST00000186728 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21794-201ENSMUST00000187056 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21880-201ENSMUST00000187275 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21826-201ENSMUST00000187451 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21198-201ENSMUST00000188393 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Gm21749-201ENSMUST00000189343 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21901-201ENSMUST00000189568 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm29424-201ENSMUST00000189716 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm28599-201ENSMUST00000189838 694 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21867-201ENSMUST00000189917 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm29269-201ENSMUST00000190087 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21722-201ENSMUST00000190153 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm28423-201ENSMUST00000190701 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21899-201ENSMUST00000190745 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21910-201ENSMUST00000191163 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21849-201ENSMUST00000191571 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm28678-201ENSMUST00000191593 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm20910-201ENSMUST00000193268 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Gm21871-201ENSMUST00000194621 696 ntBASIC20.03■□□□□ 0.8
Tom1O88746 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tom1O88746 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tom1O88746 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tom1O88746 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Gm9816-201ENSMUST00000122292 1414 ntBASIC20.02■□□□□ 0.8
Tom1O88746 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.02■□□□□ 0.8
Tom1O88746 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tom1O88746 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Gm15236-201ENSMUST00000117309 379 ntBASIC20.02■□□□□ 0.8
Tom1O88746 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.02■□□□□ 0.8
Tom1O88746 Mir7654-201ENSMUST00000185082 70 ntBASIC20.02■□□□□ 0.8
Tom1O88746 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.02■□□□□ 0.8
Tom1O88746 AA619741-201ENSMUST00000195095 646 ntBASIC20.02■□□□□ 0.8
Tom1O88746 Gm37466-201ENSMUST00000195692 652 ntBASIC20.02■□□□□ 0.8
Tom1O88746 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tom1O88746 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tom1O88746 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms