Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc28a2O88627 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Slc28a2O88627 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.62□□□□□ -0.23
Slc28a2O88627 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc28a2O88627 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.62□□□□□ -0.23
Slc28a2O88627 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Slc28a2O88627 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc28a2O88627 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc28a2O88627 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Olfr129-201ENSMUST00000122318 993 ntBASIC13.61□□□□□ -0.23
Slc28a2O88627 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.61□□□□□ -0.23
Slc28a2O88627 Mir3081-201ENSMUST00000175305 84 ntBASIC13.61□□□□□ -0.23
Slc28a2O88627 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.61□□□□□ -0.23
Slc28a2O88627 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc28a2O88627 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc28a2O88627 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.6□□□□□ -0.23
Slc28a2O88627 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc28a2O88627 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc28a2O88627 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Slc28a2O88627 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms