Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.14□□□□□ -0.15
Cops4O88544 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cops4O88544 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cops4O88544 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.13□□□□□ -0.15
Cops4O88544 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.13□□□□□ -0.15
Cops4O88544 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Cops4O88544 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.13□□□□□ -0.15
Cops4O88544 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.13□□□□□ -0.15
Cops4O88544 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Cops4O88544 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cops4O88544 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.13□□□□□ -0.15
Cops4O88544 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.13□□□□□ -0.15
Cops4O88544 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.13□□□□□ -0.15
Cops4O88544 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.13□□□□□ -0.15
Cops4O88544 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cops4O88544 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cops4O88544 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cops4O88544 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cops4O88544 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.12□□□□□ -0.15
Cops4O88544 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.12□□□□□ -0.15
Cops4O88544 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cops4O88544 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cops4O88544 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops4O88544 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops4O88544 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops4O88544 Gm10013-201ENSMUST00000106074 672 ntBASIC14.11□□□□□ -0.15
Cops4O88544 Gm10052-201ENSMUST00000168019 960 ntBASIC14.11□□□□□ -0.15
Cops4O88544 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.11□□□□□ -0.15
Cops4O88544 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.11□□□□□ -0.15
Cops4O88544 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.11□□□□□ -0.15
Cops4O88544 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Gm18032-201ENSMUST00000222541 538 ntBASIC14.11□□□□□ -0.15
Cops4O88544 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops4O88544 Gm7729-201ENSMUST00000050143 801 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms