Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.72□□□□□ -0.21
Cops3O88543 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.72□□□□□ -0.21
Cops3O88543 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cops3O88543 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Cops3O88543 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.72□□□□□ -0.21
Cops3O88543 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cops3O88543 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cops3O88543 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cops3O88543 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cops3O88543 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.71□□□□□ -0.21
Cops3O88543 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.71□□□□□ -0.21
Cops3O88543 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cops3O88543 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cops3O88543 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.71□□□□□ -0.22
Cops3O88543 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cops3O88543 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Efs-202ENSMUST00000227037 2540 ntBASIC13.7□□□□□ -0.22
Cops3O88543 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cops3O88543 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cops3O88543 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cops3O88543 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cops3O88543 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cops3O88543 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cops3O88543 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.69□□□□□ -0.22
Cops3O88543 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cops3O88543 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms