Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Gm6443-201ENSMUST00000203599 874 ntBASIC15.07■□□□□ 0
Pdlim1O70400 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pdlim1O70400 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pdlim1O70400 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.06■□□□□ 0
Pdlim1O70400 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pdlim1O70400 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.06■□□□□ 0
Pdlim1O70400 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.06■□□□□ 0
Pdlim1O70400 Gm18246-201ENSMUST00000221023 728 ntBASIC15.06■□□□□ 0
Pdlim1O70400 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.06■□□□□ 0
Pdlim1O70400 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Pdlim1O70400 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Pdlim1O70400 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Pdlim1O70400 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Pdlim1O70400 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Pdlim1O70400 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.06■□□□□ 0
Pdlim1O70400 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.05■□□□□ 0
Pdlim1O70400 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pdlim1O70400 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.05■□□□□ -0
Pdlim1O70400 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.05■□□□□ -0
Pdlim1O70400 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pdlim1O70400 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.05■□□□□ -0
Pdlim1O70400 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.05■□□□□ -0
Pdlim1O70400 Gm18206-201ENSMUST00000207027 926 ntBASIC15.05■□□□□ -0
Pdlim1O70400 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.05■□□□□ -0
Pdlim1O70400 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pdlim1O70400 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pdlim1O70400 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.04■□□□□ -0
Pdlim1O70400 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.04■□□□□ -0
Pdlim1O70400 Gm5364-201ENSMUST00000216789 889 ntBASIC15.04■□□□□ -0
Pdlim1O70400 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pdlim1O70400 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.04■□□□□ -0
Pdlim1O70400 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.04■□□□□ -0
Pdlim1O70400 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pdlim1O70400 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pdlim1O70400 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.04■□□□□ -0
Pdlim1O70400 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Pdlim1O70400 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms