Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Gm25990-201ENSMUST00000102440 86 ntBASIC14.48□□□□□ -0.09
Rdh5O55240 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rdh5O55240 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.48□□□□□ -0.09
Rdh5O55240 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.48□□□□□ -0.09
Rdh5O55240 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.48□□□□□ -0.09
Rdh5O55240 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rdh5O55240 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.48□□□□□ -0.09
Rdh5O55240 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.48□□□□□ -0.09
Rdh5O55240 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rdh5O55240 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Rdh5O55240 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.47□□□□□ -0.09
Rdh5O55240 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
Rdh5O55240 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Rdh5O55240 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.47□□□□□ -0.09
Rdh5O55240 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.47□□□□□ -0.09
Rdh5O55240 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.47□□□□□ -0.09
Rdh5O55240 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.47□□□□□ -0.09
Rdh5O55240 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Rdh5O55240 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.47□□□□□ -0.09
Rdh5O55240 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rdh5O55240 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rdh5O55240 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Rdh5O55240 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.46□□□□□ -0.09
Rdh5O55240 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rdh5O55240 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.46□□□□□ -0.09
Rdh5O55240 Gm7862-201ENSMUST00000121461 292 ntBASIC14.46□□□□□ -0.09
Rdh5O55240 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.46□□□□□ -0.09
Rdh5O55240 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.46□□□□□ -0.09
Rdh5O55240 Gm6089-201ENSMUST00000197666 938 ntBASIC14.46□□□□□ -0.09
Rdh5O55240 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rdh5O55240 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rdh5O55240 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Rdh5O55240 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rdh5O55240 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Rdh5O55240 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rdh5O55240 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms