Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
BckdkO55028 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.19□□□□□ -0.14
BckdkO55028 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BckdkO55028 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
BckdkO55028 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Gm7222-201ENSMUST00000117512 906 ntBASIC14.18□□□□□ -0.14
BckdkO55028 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 Gm11780-201ENSMUST00000136880 516 ntBASIC14.18□□□□□ -0.14
BckdkO55028 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.18□□□□□ -0.14
BckdkO55028 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
BckdkO55028 Gm6550-201ENSMUST00000187574 993 ntBASIC14.18□□□□□ -0.14
BckdkO55028 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.18□□□□□ -0.14
BckdkO55028 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.18□□□□□ -0.14
BckdkO55028 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.18□□□□□ -0.14
BckdkO55028 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
BckdkO55028 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
BckdkO55028 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.17□□□□□ -0.14
BckdkO55028 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.17□□□□□ -0.14
BckdkO55028 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.17□□□□□ -0.14
BckdkO55028 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.17□□□□□ -0.14
BckdkO55028 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.17□□□□□ -0.14
BckdkO55028 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.17□□□□□ -0.14
BckdkO55028 Gm27525-201ENSMUST00000184465 107 ntBASIC14.17□□□□□ -0.14
BckdkO55028 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.17□□□□□ -0.14
BckdkO55028 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.17□□□□□ -0.14
BckdkO55028 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
BckdkO55028 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.17□□□□□ -0.14
BckdkO55028 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
BckdkO55028 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
BckdkO55028 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
BckdkO55028 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
BckdkO55028 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.16□□□□□ -0.14
BckdkO55028 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.16□□□□□ -0.14
BckdkO55028 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.16□□□□□ -0.14
BckdkO55028 Gm8000-201ENSMUST00000188378 592 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms