Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.71□□□□□ -0.21
NlkO54949 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NlkO54949 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Gm12134-201ENSMUST00000122109 520 ntBASIC13.71□□□□□ -0.21
NlkO54949 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.71□□□□□ -0.21
NlkO54949 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.71□□□□□ -0.21
NlkO54949 Gm25016-201ENSMUST00000158399 131 ntBASIC13.71□□□□□ -0.21
NlkO54949 Gm6659-201ENSMUST00000174752 547 ntBASIC13.71□□□□□ -0.21
NlkO54949 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.71□□□□□ -0.21
NlkO54949 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NlkO54949 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
NlkO54949 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NlkO54949 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
NlkO54949 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NlkO54949 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NlkO54949 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NlkO54949 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NlkO54949 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NlkO54949 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NlkO54949 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Mir770-201ENSMUST00000103252 94 ntBASIC13.7□□□□□ -0.22
NlkO54949 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 AA414768-201ENSMUST00000121924 1257 ntBASIC13.7□□□□□ -0.22
NlkO54949 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.7□□□□□ -0.22
NlkO54949 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.7□□□□□ -0.22
NlkO54949 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NlkO54949 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.7□□□□□ -0.22
NlkO54949 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NlkO54949 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.7□□□□□ -0.22
NlkO54949 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NlkO54949 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NlkO54949 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
NlkO54949 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NlkO54949 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Gm6623-201ENSMUST00000173570 544 ntBASIC13.69□□□□□ -0.22
NlkO54949 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.69□□□□□ -0.22
NlkO54949 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NlkO54949 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NlkO54949 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.69□□□□□ -0.22
NlkO54949 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.69□□□□□ -0.22
NlkO54949 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NlkO54949 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.68□□□□□ -0.22
NlkO54949 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
NlkO54949 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.68□□□□□ -0.22
NlkO54949 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
NlkO54949 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NlkO54949 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.68□□□□□ -0.22
NlkO54949 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms