Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccr6O54689 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Carlr-201ENSMUST00000181515 2574 ntBASIC12.85□□□□□ -0.35
Ccr6O54689 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Ccr6O54689 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ccr6O54689 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccr6O54689 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Gm12441-201ENSMUST00000121806 588 ntBASIC12.84□□□□□ -0.35
Ccr6O54689 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.84□□□□□ -0.35
Ccr6O54689 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccr6O54689 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccr6O54689 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccr6O54689 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccr6O54689 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.83□□□□□ -0.35
Ccr6O54689 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccr6O54689 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccr6O54689 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccr6O54689 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccr6O54689 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccr6O54689 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Gm12527-201ENSMUST00000117967 564 ntBASIC12.83□□□□□ -0.36
Ccr6O54689 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccr6O54689 Gm21814-202ENSMUST00000203277 873 ntBASIC12.83□□□□□ -0.36
Ccr6O54689 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccr6O54689 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccr6O54689 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccr6O54689 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.83□□□□□ -0.36
Ccr6O54689 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ccr6O54689 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccr6O54689 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccr6O54689 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccr6O54689 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Ccr6O54689 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Gm16061-201ENSMUST00000122167 857 ntBASIC12.82□□□□□ -0.36
Ccr6O54689 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccr6O54689 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.82□□□□□ -0.36
Ccr6O54689 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms