Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.55■□□□□ 0.24
Clk2O35491 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.55■□□□□ 0.24
Clk2O35491 Gm8396-201ENSMUST00000057361 823 ntBASIC16.55■□□□□ 0.24
Clk2O35491 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.55■□□□□ 0.24
Clk2O35491 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.55■□□□□ 0.24
Clk2O35491 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.55■□□□□ 0.24
Clk2O35491 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clk2O35491 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clk2O35491 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clk2O35491 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.54■□□□□ 0.24
Clk2O35491 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Clk2O35491 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Clk2O35491 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.54■□□□□ 0.24
Clk2O35491 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.54■□□□□ 0.24
Clk2O35491 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Clk2O35491 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Clk2O35491 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.54■□□□□ 0.24
Clk2O35491 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.54■□□□□ 0.24
Clk2O35491 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clk2O35491 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Clk2O35491 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clk2O35491 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.53■□□□□ 0.24
Clk2O35491 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clk2O35491 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.53■□□□□ 0.24
Clk2O35491 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Clk2O35491 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.53■□□□□ 0.24
Clk2O35491 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Clk2O35491 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Celf4-206ENSMUST00000224553 1729 ntBASIC16.53■□□□□ 0.24
Clk2O35491 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clk2O35491 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.52■□□□□ 0.24
Clk2O35491 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Clk2O35491 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.52■□□□□ 0.24
Clk2O35491 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
Clk2O35491 Rprl2-201ENSMUST00000157150 290 ntBASIC16.52■□□□□ 0.24
Clk2O35491 Gm16026-204ENSMUST00000162652 683 ntBASIC16.52■□□□□ 0.24
Clk2O35491 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.52■□□□□ 0.24
Clk2O35491 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.52■□□□□ 0.24
Clk2O35491 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.52■□□□□ 0.24
Clk2O35491 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.52■□□□□ 0.24
Clk2O35491 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.52■□□□□ 0.24
Clk2O35491 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clk2O35491 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clk2O35491 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Clk2O35491 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Clk2O35491 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clk2O35491 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms