Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn6O35454 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn6O35454 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn6O35454 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Clcn6O35454 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Clcn6O35454 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn6O35454 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Clcn6O35454 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clcn6O35454 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm11835-201ENSMUST00000120635 663 ntBASIC16.58■□□□□ 0.24
Clcn6O35454 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn6O35454 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm28934-201ENSMUST00000186491 346 ntBASIC16.58■□□□□ 0.24
Clcn6O35454 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC16.58■□□□□ 0.24
Clcn6O35454 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clcn6O35454 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clcn6O35454 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn6O35454 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn6O35454 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Clcn6O35454 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.58■□□□□ 0.24
Clcn6O35454 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Clcn6O35454 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clcn6O35454 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clcn6O35454 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Clcn6O35454 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.57■□□□□ 0.24
Clcn6O35454 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.57■□□□□ 0.24
Clcn6O35454 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clcn6O35454 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Gm6659-201ENSMUST00000174752 547 ntBASIC16.57■□□□□ 0.24
Clcn6O35454 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Clcn6O35454 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Clcn6O35454 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn6O35454 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn6O35454 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clcn6O35454 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clcn6O35454 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.56■□□□□ 0.24
Clcn6O35454 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Clcn6O35454 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.56■□□□□ 0.24
Clcn6O35454 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Gm37241-201ENSMUST00000191736 523 ntBASIC16.56■□□□□ 0.24
Clcn6O35454 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn6O35454 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clcn6O35454 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.56■□□□□ 0.24
Clcn6O35454 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clcn6O35454 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Clcn6O35454 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.55■□□□□ 0.24
Clcn6O35454 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Clcn6O35454 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.55■□□□□ 0.24
Clcn6O35454 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.55■□□□□ 0.24
Clcn6O35454 Mir1668-201ENSMUST00000184114 107 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms