Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Capn1O35350 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.17□□□□□ -0.14
Capn1O35350 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.17□□□□□ -0.14
Capn1O35350 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Capn1O35350 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Capn1O35350 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Capn1O35350 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Capn1O35350 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Capn1O35350 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Gm27702-201ENSMUST00000184512 56 ntBASIC14.16□□□□□ -0.14
Capn1O35350 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Capn1O35350 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Capn1O35350 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.16□□□□□ -0.14
Capn1O35350 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.16□□□□□ -0.14
Capn1O35350 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Capn1O35350 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.15□□□□□ -0.14
Capn1O35350 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.15□□□□□ -0.14
Capn1O35350 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Capn1O35350 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.15□□□□□ -0.14
Capn1O35350 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.15□□□□□ -0.14
Capn1O35350 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.15□□□□□ -0.14
Capn1O35350 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.15□□□□□ -0.14
Capn1O35350 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Capn1O35350 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Capn1O35350 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Capn1O35350 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Capn1O35350 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms