Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cx3cl1O35188 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.37□□□□□ -0.11
Cx3cl1O35188 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Gm13036-201ENSMUST00000117799 748 ntBASIC14.37□□□□□ -0.11
Cx3cl1O35188 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.37□□□□□ -0.11
Cx3cl1O35188 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cx3cl1O35188 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.36□□□□□ -0.11
Cx3cl1O35188 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cx3cl1O35188 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.35□□□□□ -0.11
Cx3cl1O35188 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cx3cl1O35188 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms