Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.6□□□□□ -0.23
Sh2b3O09039 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.6□□□□□ -0.23
Sh2b3O09039 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sh2b3O09039 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.6□□□□□ -0.23
Sh2b3O09039 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.59□□□□□ -0.23
Sh2b3O09039 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm11764-201ENSMUST00000120221 623 ntBASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm14822-201ENSMUST00000122247 291 ntBASIC13.59□□□□□ -0.23
Sh2b3O09039 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm27646-201ENSMUST00000183989 110 ntBASIC13.59□□□□□ -0.23
Sh2b3O09039 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sh2b3O09039 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sh2b3O09039 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2b3O09039 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.23
Sh2b3O09039 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2b3O09039 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2b3O09039 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Sh2b3O09039 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2b3O09039 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sh2b3O09039 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh2b3O09039 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.58□□□□□ -0.24
Sh2b3O09039 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.58□□□□□ -0.24
Sh2b3O09039 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.58□□□□□ -0.24
Sh2b3O09039 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sh2b3O09039 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms