Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm5177-201ENSMUST00000183092 997 ntBASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm44492-201ENSMUST00000197012 141 ntBASIC15.2■□□□□ 0.02
Gm3139J3QK78 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm3139J3QK78 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.19■□□□□ 0.02
Gm3139J3QK78 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Gm17968-201ENSMUST00000194902 784 ntBASIC15.19■□□□□ 0.02
Gm3139J3QK78 Gm2272-201ENSMUST00000194903 582 ntBASIC15.19■□□□□ 0.02
Gm3139J3QK78 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gm3139J3QK78 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gm27301-201ENSMUST00000184012 127 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gm2756-201ENSMUST00000195851 400 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Thap2-203ENSMUST00000218989 527 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.18■□□□□ 0.02
Gm3139J3QK78 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Gm3139J3QK78 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Gm24513-201ENSMUST00000174964 138 ntBASIC15.17■□□□□ 0.02
Gm3139J3QK78 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Gm3139J3QK78 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms