Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Gm18062-201ENSMUST00000208020 547 ntBASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Gm18055-201ENSMUST00000208254 547 ntBASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.12■□□□□ 0.33
Syngap1F6SEU4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm7488-201ENSMUST00000117148 684 ntBASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm7774-201ENSMUST00000200064 533 ntBASIC17.11■□□□□ 0.33
Syngap1F6SEU4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 AC149294.4-201ENSMUST00000227870 882 ntBASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Syngap1F6SEU4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Gm13597-201ENSMUST00000121239 375 ntBASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Mir8102-201ENSMUST00000184148 139 ntBASIC17.1■□□□□ 0.33
Syngap1F6SEU4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Syngap1F6SEU4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Rprl2-201ENSMUST00000157150 290 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Gm27306-201ENSMUST00000183970 107 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Gm43630-201ENSMUST00000201550 776 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Gm19164-201ENSMUST00000210667 640 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 AC153962.4-201ENSMUST00000217878 242 ntBASIC17.09■□□□□ 0.33
Syngap1F6SEU4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms