Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC19.24■□□□□ 0.67
Col22a1E9Q7P1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Col22a1E9Q7P1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm23931-201ENSMUST00000103842 109 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm38241-201ENSMUST00000192641 898 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 AA619741-201ENSMUST00000195095 646 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm44974-201ENSMUST00000206387 1279 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Gm9229-201ENSMUST00000222777 126 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.22■□□□□ 0.67
Col22a1E9Q7P1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Col22a1E9Q7P1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Gm12341-201ENSMUST00000119724 503 ntBASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Gm44799-201ENSMUST00000207639 1202 ntBASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Col22a1E9Q7P1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 Gm14723-201ENSMUST00000118686 215 ntBASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Col22a1E9Q7P1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms