Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.29■□□□□ 0.52
Ube4aE9Q735 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm38225-201ENSMUST00000194001 393 ntBASIC18.29■□□□□ 0.52
Ube4aE9Q735 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ube4aE9Q735 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 App-207ENSMUST00000227737 2827 ntBASIC18.28■□□□□ 0.52
Ube4aE9Q735 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.28■□□□□ 0.52
Ube4aE9Q735 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.28■□□□□ 0.52
Ube4aE9Q735 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.28■□□□□ 0.52
Ube4aE9Q735 AC126408.1-201ENSMUST00000225184 523 ntBASIC18.28■□□□□ 0.52
Ube4aE9Q735 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ube4aE9Q735 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.27■□□□□ 0.52
Ube4aE9Q735 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Celf4-206ENSMUST00000224553 1729 ntBASIC18.27■□□□□ 0.52
Ube4aE9Q735 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC18.27■□□□□ 0.52
Ube4aE9Q735 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Ube4aE9Q735 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Gm43767-201ENSMUST00000198933 381 ntBASIC18.27■□□□□ 0.52
Ube4aE9Q735 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ube4aE9Q735 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ube4aE9Q735 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Ube4aE9Q735 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.26■□□□□ 0.51
Ube4aE9Q735 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.26■□□□□ 0.51
Ube4aE9Q735 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ube4aE9Q735 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms