Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chd2E9PZM4 AC154687.2-201ENSMUST00000223853 640 ntBASIC20.7■□□□□ 0.9
Chd2E9PZM4 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd2E9PZM4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Gm4984-201ENSMUST00000115987 360 ntBASIC20.69■□□□□ 0.9
Chd2E9PZM4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Gm5354-201ENSMUST00000182417 973 ntBASIC20.69■□□□□ 0.9
Chd2E9PZM4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Chd2E9PZM4 Gm5356-201ENSMUST00000093326 615 ntBASIC20.69■□□□□ 0.9
Chd2E9PZM4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chd2E9PZM4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Gm13392-201ENSMUST00000117708 150 ntBASIC20.67■□□□□ 0.9
Chd2E9PZM4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.67■□□□□ 0.9
Chd2E9PZM4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC20.67■□□□□ 0.9
Chd2E9PZM4 AA619741-201ENSMUST00000195095 646 ntBASIC20.67■□□□□ 0.9
Chd2E9PZM4 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Gm13226-201ENSMUST00000117838 404 ntBASIC20.67■□□□□ 0.9
Chd2E9PZM4 Gm9200-201ENSMUST00000118513 1354 ntBASIC20.67■□□□□ 0.9
Chd2E9PZM4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chd2E9PZM4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Olfr286-202ENSMUST00000205305 969 ntBASIC20.66■□□□□ 0.9
Chd2E9PZM4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chd2E9PZM4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.65■□□□□ 0.9
Chd2E9PZM4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Gm12957-201ENSMUST00000117835 377 ntBASIC20.65■□□□□ 0.9
Chd2E9PZM4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd2E9PZM4 Mir7654-201ENSMUST00000185082 70 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms