Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gm28043E0CXC2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Mir6404-201ENSMUST00000183699 94 ntBASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Gm21362-201ENSMUST00000194272 928 ntBASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Gm7367-201ENSMUST00000057611 492 ntBASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Gm28043E0CXC2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm28043E0CXC2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gm17807-201ENSMUST00000186869 298 ntBASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms