Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gm27631-201ENSMUST00000184163 466 ntBASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gm37917-201ENSMUST00000194711 392 ntBASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gm18062-201ENSMUST00000208020 547 ntBASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Gm18055-201ENSMUST00000208254 547 ntBASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hfm1D3Z4R1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
Hfm1D3Z4R1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Gm13829-201ENSMUST00000119600 138 ntBASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hfm1D3Z4R1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Gm18624-201ENSMUST00000220966 658 ntBASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hfm1D3Z4R1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 AC156016.3-201ENSMUST00000228623 344 ntBASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Celf4-206ENSMUST00000224553 1729 ntBASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hfm1D3Z4R1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Gm45453-201ENSMUST00000211758 853 ntBASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 AC149588.3-201ENSMUST00000227515 150 ntBASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hfm1D3Z4R1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Gm7820-201ENSMUST00000121012 1052 ntBASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms