Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.84■□□□□ 0.45
Usp42B2RQC2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Gm5364-201ENSMUST00000216789 889 ntBASIC17.84■□□□□ 0.45
Usp42B2RQC2 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Usp42B2RQC2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Usp42B2RQC2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.83■□□□□ 0.44
Usp42B2RQC2 AW822252-206ENSMUST00000208904 237 ntBASIC17.83■□□□□ 0.44
Usp42B2RQC2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Usp42B2RQC2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.82■□□□□ 0.44
Usp42B2RQC2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.82■□□□□ 0.44
Usp42B2RQC2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.82■□□□□ 0.44
Usp42B2RQC2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Usp42B2RQC2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Usp42B2RQC2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.81■□□□□ 0.44
Usp42B2RQC2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms